Hey fellow Nairobi hustler (or wherever you’re grinding from) – if you’re a small business owner staring at your iTax dashboard right now, heart racing because another assessment just dropped, or you’re that café owner in Westlands wondering why your genuine expenses are suddenly treated as “profit,” you’re not alone.
It’s January 2026, the economy’s trying to bounce back, but the Kenya Revenue Authority (KRA) tax system feels like it’s rigged against the everyday entrepreneur. From crippling penalties that snowball overnight to a compliance maze that punishes the informal suppliers most SMEs rely on, the frustrations are real and they’re piling up.
We’ve seen it all: missed revenue targets by billions, stories of extreme stress (including tragic incidents tied to tax disputes) and a wave of new rules kicking in this year that could literally tax money you’ve already spent. Officials talk about efficiency and transparency, but for many of us, it’s more like endless stress and cashflow squeezes. Let’s break down the major pain points in Kenya’s tax system today – no sugarcoating, just the raw truth business owners are living with.

1. The Crushing Weight of Penalties & Interest – One Slip and You’re Buried
This is the biggest scream on the streets. Late filing? 5% of tax due or KSh 20,000 (whichever higher). Late payment? Add 1% interest per month that compounds like crazy. Miss a deadline because of iTax glitches (which happened big time in 2025), and you’re hit hard – even if KRA sometimes waives them as a “lifeline.”
But here’s the killer: penalties don’t care about your cashflow struggles. For SMEs already hit by slow sales, those extras turn a manageable debt into a monster. We’ve had cases where interest balloons a Sh1 million bill to Sh3 million. And with KRA’s “pressure-first” approach, enforcement feels relentless – agency notices, frozen accounts, blacklisting from tenders – before you even get a fair hearing.
Real talk from the ground: Taxpayers report feeling “broken” by the system, with some extreme cases linked to mental health crises over disputes. The amnesty extensions (like the one ending June 2025) helped some, but new debts keep coming.
2. The 2026 Expense Rules Nightmare – Paying Tax on Money You’ve Already Spent
This one’s fresh and brutal. Starting January 2026, KRA cross-checks all your declared expenses against eTIMS invoices, withholding records, and import data. No valid eTIMS proof? That expense gets treated as profit, inflating your taxable income.
Imagine your hardware shop in Eastlands buys supplies from an informal supplier (common because they’re cheaper and faster). You spend Sh700,000 without eTIMS docs – boom, KRA adds that to your profits, slapping you with extra income tax. Many SMEs rely on jua kali networks for flexibility; now “cheap” becomes insanely expensive. Experts warn some businesses might not survive this shift – it’s hitting the informal economy hardest and squeezing cashflow when we need it most.
Why it hurts: Most small traders can’t force suppliers to go digital overnight. Result? Higher tax bills on genuine costs, less money to restock or pay staff.
3. System Complexity & Constant Changes – You Can’t Keep Up
The tax laws change faster than matatu routes. Finance Act 2025 brought tweaks (like longer refund timelines, new excise on digital stuff), but 2026 rules add layers: stricter validations, automated assessments, eTIMS enforcement ramping up. Turnover tax jumped to 3% for some MSMEs, loss carry-forward limited to 5 years – it’s a lot.
For busy owners without full-time accountants, it’s overwhelming. iTax glitches, confusing portals, and unclear guidelines lead to “human errors” that KRA then penalizes. SMEs often miss incentives (deductions, exemptions) because the system’s too complex to navigate.
Pro tip from the trenches: Many overlook simple reliefs like mortgage interest deductions or startup incentives – free money left on the table because who has time to decode it all?
4. Unfair Enforcement & Narrow Tax Base – The Little Guy Pays While Others Skate
Complaints flood in about KRA being “overzealous” with local businesses while turning a blind eye to certain sectors or informal giants. Unfair competition thrives when some players skip eTIMS or returns. Meanwhile, compliant SMEs bear the brunt – audits, disputes and pressure to prove every shilling.
The tax base is too narrow (reliant on salaried folks and formal businesses), so enforcement hits hard where it’s easiest. Pending government bills to suppliers (billions owed) add insult – taxpayers pay up while waiting months for refunds or payments.
And audits? They trigger fast, with limited time to respond. Objections need perfect filing, or you’re out.
5. Digital Compliance Gaps & the Divide – Not Everyone’s Online
eTIMS is mandatory, but rural traders or those without reliable internet struggle. Glitches during peak times (like 2025 filing chaos) force extensions and waivers, but the fear lingers. The shift to automation is great for efficiency, but it leaves many behind – widening the gap between big players and hustlers.
Plus, data privacy worries: AI scanning your books sounds efficient until a breach happens.

The Bottom Line: It’s Time for Real Relief, Not Just Promises
Kenya’s tax system aims to fund development, but right now, it feels like it’s strangling the very SMEs (98% of businesses) that create jobs and keep the economy alive. Penalties that destroy cashflow, rules that tax spent money, constant changes, and uneven enforcement – these pain points aren’t abstract; they’re keeping owners up at night.
We’re pushing forward with AI and automation for transparency, but without addressing these core frustrations, trust erodes. Business owners need simpler rules, fairer enforcement, more incentives, and realistic timelines.
If you’re feeling this heat, you’re not alone – share your biggest tax headache in the comments. And if you’re drowning in assessments or 2026 rules, talk to a tax advisor early. Knowledge is power, and sometimes, a good objection or plan is your lifeline.
Stay hustling, stay compliant, and let’s hope 2026 brings more balance than burden. Tulipe Ushuru… but fairly.